STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_09774NAD-dependent epimerase/dehydratase. (602 aa)    
Predicted Functional Partners:
CCACVL1_17371
UDP-glucose 6-dehydrogenase.
  
 
 0.918
CCACVL1_06503
UDP-glucose 6-dehydrogenase.
  
 
 0.918
CCACVL1_13434
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
0.872
CCACVL1_20901
NAD-dependent epimerase/dehydratase.
  
 
 0.869
CCACVL1_13659
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
0.869
CCACVL1_22890
Galactose-1-phosphate uridyl transferase, class I.
   
 
 0.849
CCACVL1_29399
Uncharacterized protein.
  
 
 0.842
CCACVL1_28823
UDP-glucose 6-dehydrogenase.
  
 
 0.842
CCACVL1_24555
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.842
CCACVL1_06153
Ribosomal protein S2.
  
 
 0.842
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.