STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_07918Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
CCACVL1_18574
Malectin_like domain-containing protein.
  
     0.496
CCACVL1_16922
LAGLIDADG_2 domain-containing protein.
  
     0.482
CCACVL1_06942
Uncharacterized protein.
  
     0.482
CCACVL1_04408
Uncharacterized protein.
  
     0.478
CCACVL1_28649
Uncharacterized protein.
  
     0.477
CCACVL1_28657
DNA (Cytosine-5)-methyltransferase DRM2-like protein.
  
     0.472
CCACVL1_26264
EGF_3 domain-containing protein.
  
     0.470
CCACVL1_12789
Photosystem II Pbs27.
  
     0.469
CCACVL1_12900
Uncharacterized protein.
  
     0.468
CCACVL1_18802
Uncharacterized protein.
  
     0.467
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.