STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_06667Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
CCACVL1_12877
Electron transfer flavoprotein, alpha subunit.
  
 0.977
CCACVL1_27527
Zinc finger, RING-type.
  
 0.974
CCACVL1_17557
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.961
CCACVL1_28922
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.927
CCACVL1_03562
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
CCACVL1_28599
Crotonase superfamily.
  
 0.908
CCACVL1_15247
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.901
CCACVL1_03179
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.901
CCACVL1_28491
Crotonase superfamily; Belongs to the SWEET sugar transporter family.
  
 0.898
CCACVL1_28504
Aminoglycoside phosphotransferase.
  
 0.882
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.