STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_05863Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
CCACVL1_10261
Nucleotide-diphospho-sugar transferase.
  
     0.435
CCACVL1_00296
Patatin group A-3-like protein.
  
     0.422
CCACVL1_24895
Zinc finger, RING/FYVE/PHD-type.
  
     0.419
CCACVL1_07861
Uncharacterized protein.
  
     0.413
CCACVL1_26439
Cation-transporting P-type ATPase.
    
 0.410
CCACVL1_21339
Cation-transporting P-type ATPase.
    
 0.410
CCACVL1_20842
Cation-transporting P-type ATPase.
    
 0.410
CCACVL1_19922
Cation-transporting P-type ATPase.
    
 0.410
CCACVL1_16645
Nickel/cobalt transporter, high-affinity.
    
 0.410
CCACVL1_16392
Cation-transporting P-type ATPase.
    
 0.410
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.