STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_05878Chaperonin ClpA/B. (690 aa)    
Predicted Functional Partners:
CCACVL1_30993
Heat shock protein 70 family.
  
 
 0.611
CCACVL1_27175
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.584
CCACVL1_17081
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
 
 0.581
CCACVL1_04569
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
 
 0.571
CCACVL1_17156
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.570
CCACVL1_00755
ClpP.
   
 
 0.568
CCACVL1_22123
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.558
CCACVL1_05874
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.549
CCACVL1_09501
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
 
 0.538
CCACVL1_05239
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
 
 0.532
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.