STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_04207WD_REPEATS_REGION domain-containing protein. (346 aa)    
Predicted Functional Partners:
CCACVL1_19007
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.826
CCACVL1_16355
DNA damage-binding protein 1-like protein.
    
 0.823
CCACVL1_16354
CPSF_A domain-containing protein.
    
 0.823
CCACVL1_21730
Uncharacterized protein.
     
 0.821
CCACVL1_24960
WD_REPEATS_REGION domain-containing protein.
     
 0.819
CCACVL1_23037
WD_REPEATS_REGION domain-containing protein.
     
 0.793
CCACVL1_09156
Protein kinase domain-containing protein.
   
 
 0.772
CCACVL1_30632
Protein kinase domain-containing protein.
   
 
 0.734
CCACVL1_26028
BHLH domain-containing protein.
   
 
 0.734
CCACVL1_24543
Uncharacterized protein.
   
 
 0.734
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.