STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCACVL1_01747GMC_OxRdtase_N domain-containing protein. (557 aa)    
Predicted Functional Partners:
CCACVL1_14713
GMC_OxRdtase_N domain-containing protein.
  
  
 
0.873
CCACVL1_21507
GMC_OxRdtase_N domain-containing protein.
  
  
 
0.872
CCACVL1_29214
Aromatic-ring-hydroxylating dioxygenase, alpha subunit.
     
 0.871
CCACVL1_01629
Uncharacterized protein.
     
 0.871
CCACVL1_14418
TPR_REGION domain-containing protein.
    
 0.840
CCACVL1_14412
ANK_REP_REGION domain-containing protein.
    
 0.840
CCACVL1_14411
ANK_REP_REGION domain-containing protein.
    
 0.840
CCACVL1_08570
Patatin/Phospholipase A2-related protein.
    
  0.832
CCACVL1_22416
Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase.
   
 
  0.826
PSD2
Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
     
 0.826
Your Current Organism:
Corchorus capsularis
NCBI taxonomy Id: 210143
Other names: C. capsularis, jute
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