STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114447741ADP-ribosylation factor-binding protein GGA1-like. (637 aa)    
Predicted Functional Partners:
LOC114444463
Rab5 GDP/GTP exchange factor-like.
    
 0.985
rabgef1
RAB guanine nucleotide exchange factor 1.
    
 0.985
LOC114441349
Rab5 GDP/GTP exchange factor-like.
    
 0.985
sorl1
Sortilin related receptor 1.
    
 
 0.925
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.908
igf2r
Insulin like growth factor 2 receptor.
    
 
 0.876
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.861
LOC114440935
ADP-ribosylation factor-binding protein GGA3-like.
  
0.858
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
  
0.857
LOC114441960
ADP-ribosylation factor-binding protein GGA1-like.
  
  
 
0.838
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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