STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437969Nuclear factor interleukin-3-regulated protein-like. (606 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.794
LOC114433440
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.794
LOC114441689
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.776
LOC114443697
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.767
LOC114429784
Uncharacterized protein C1orf198 homolog.
   
 0.767
LOC114447202
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.767
LOC114439950
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.750
LOC114441562
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.750
LOC114433655
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like.
   
 0.746
LOC114438549
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like.
   
 0.746
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.