STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438249Coiled-coil domain-containing protein 151-like. (485 aa)    
Predicted Functional Partners:
ttc25
Tetratricopeptide repeat domain 25.
  
 0.923
ENSPRNP00000006320
annotation not available
   
 0.910
ENSPRNP00000055986
annotation not available
   
 0.910
armc4
Armadillo repeat containing 4.
    
 0.866
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.853
efcab1
EF-hand calcium binding domain 1.
    
 0.798
LOC114443585
Rho-related GTP-binding protein RhoF-like.
  
 0.784
LOC114439217
Rho-related GTP-binding protein RhoA-C-like.
  
 0.781
LOC114437949
Transforming protein RhoA.
  
 0.781
rnd3
Rho family GTPase 3.
  
 0.781
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.