STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443362Peroxiredoxin-1-like. (197 aa)    
Predicted Functional Partners:
srxn1
Sulfiredoxin 1.
   
 0.947
ENSPRNP00000004910
annotation not available
  
 0.939
prdx5
Peroxiredoxin 5.
  
 0.922
ENSPRNP00000007755
annotation not available
  
 0.921
ENSPRNP00000007756
annotation not available
  
 0.921
LOC114442728
Elongation factor 1-gamma.
   
 0.884
txn2
Thioredoxin 2.
  
 0.866
LOC114449477
Peroxiredoxin-1.
  
  
 
0.835
txndc5
Thioredoxin domain containing 5.
  
 0.826
cat
Catalase.
  
 
 0.824
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.