STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432559G protein-coupled receptor kinase 6-like. (576 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor.
    
 0.916
LOC114427229
C-X-C chemokine receptor type 2-like.
    
 0.856
ENSPRNP00000055141
Chemokine (C-X-C motif) receptor 1.
    
 0.856
LOC114426291
C-X-C chemokine receptor type 1-like.
    
 0.856
LOC114449745
C-X-C chemokine receptor type 4-like.
    
 0.850
cxcr4
C-X-C motif chemokine receptor 4.
    
 0.850
LOC114449027
C-C chemokine receptor type 5-like.
    
  0.816
csnk1a1
Casein kinase 1 alpha 1.
     
 0.812
csnk1g1
Casein kinase 1 gamma 1.
     
 0.800
gng2
G protein subunit gamma 2.
    
 0.775
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.