STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436375TBC1 domain family member 24-like. (576 aa)    
Predicted Functional Partners:
LOC114440113
Ras-related protein Rab-35-like.
    
 0.720
rab35
RAB35, member RAS oncogene family.
    
 0.720
ift27
Intraflagellar transport 27.
    
 0.643
ENSPRNP00000029885
ADP-ribosylation factor 6b.
    
 
 0.492
arf6
ADP ribosylation factor 6.
    
 
 0.492
cdc16
Cell division cycle 16.
      
 0.449
TBC1D13
TBC1 domain family member 13.
      
 0.433
arl15
ADP ribosylation factor like GTPase 15.
    
 
 0.408
tubgcp6
Tubulin gamma complex associated protein 6.
      
 0.400
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.