STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000000089Growth arrest-specific 8. (492 aa)    
Predicted Functional Partners:
coasy
Coenzyme A synthase.
    
 0.936
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.780
ENSPRNP00000009787
annotation not available
    
 
 0.774
mlx
MAX dimerization protein MLX.
     
 0.744
pank4
Pantothenate kinase 4 (inactive).
     
 0.724
LOC114448856
Axonemal dynein light intermediate polypeptide 1-like.
  
 
 
 0.720
LOC114448819
Axonemal dynein light intermediate polypeptide 1-like.
  
 
 
 0.720
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.718
LOC114437726
Cytochrome c oxidase assembly protein COX19.
     
 0.718
tyms
Thymidylate synthetase.
     
 0.716
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.