STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFARBifunctional apoptosis regulator. (450 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
  0.773
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.755
ENSPRNP00000010757
BRCA1 associated RING domain 1.
    
 0.704
tp53bp1
Tumor protein p53 binding protein 1.
    
 0.699
trip12
Thyroid hormone receptor interactor 12.
    
 0.665
fut8
Fucosyltransferase 8.
     
 0.660
skp1
S-phase kinase associated protein 1.
    
 0.655
LOC114450811
NEDD8-like.
    
 0.634
LOC114449449
NEDD8.
    
 0.634
nbn
Nibrin.
    
 0.633
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.