STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436360NUAK family SNF1-like kinase 2. (617 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11.
    
0.722
prkaa1
Protein kinase AMP-activated catalytic subunit alpha 1.
  
 
0.447
prkaa2
Protein kinase AMP-activated catalytic subunit alpha 2.
  
 
0.441
LOC114443936
Serine/threonine-protein kinase NIM1-like.
  
 
0.434
ENSPRNP00000023540
annotation not available
  
 
0.432
LOC114434588
Serine/threonine-protein kinase NIM1-like.
  
 
0.430
ENSPRNP00000055923
annotation not available
  
 
0.430
ENSPRNP00000055939
annotation not available
  
 
0.428
usp9x
Ubiquitin specific peptidase 9 X-linked.
    
 
 0.421
nim1k
NIM1 serine/threonine protein kinase.
  
 
0.409
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.