STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traddTNFRSF1A associated via death domain. (292 aa)    
Predicted Functional Partners:
ripk1
Receptor interacting serine/threonine kinase 1.
   
 0.997
tnfrsf1a
TNF receptor superfamily member 1A.
    
 0.997
LOC114433164
FAS-associated death domain protein-like.
   
 0.990
LOC114443749
TNF receptor-associated factor 2-like.
    
 0.978
LOC114441942
TNF receptor-associated factor 2-like.
    
 0.978
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.977
LOC114445779
Baculoviral IAP repeat-containing protein 2-like.
   
 0.976
ENSPRNP00000020556
annotation not available
    
 0.971
LOC114426288
Caspase-8-like.
    
 0.971
LOC114443721
TNF receptor-associated factor 2-like.
    
 0.970
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.