STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000001042Mitochondrial ribosomal protein S28. (116 aa)    
Predicted Functional Partners:
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.999
ENSPRNP00000028991
Mitochondrial ribosomal protein S23.
   
  0.999
LOC114428707
28S ribosomal protein S21, mitochondrial-like.
   
  0.999
mrps22
Mitochondrial ribosomal protein S22.
   
  0.999
mrps16
Mitochondrial ribosomal protein S16.
   
  0.999
mrps26
Mitochondrial ribosomal protein S26.
   
 0.999
mrps33
Mitochondrial ribosomal protein S33.
   
  0.998
mrps25
Mitochondrial ribosomal protein S25.
   
  0.998
mrps35
Mitochondrial ribosomal protein S35.
   
  0.998
ptcd3
Pentatricopeptide repeat domain 3.
    
  0.998
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.