STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipo9Importin 9. (1057 aa)    
Predicted Functional Partners:
LOC114437308
Nucleosome assembly protein 1-like 4.
   
 
 0.881
nap1l1
Nucleosome assembly protein 1 like 1.
   
 
 0.880
umps
Uridine monophosphate synthetase.
   
 
  0.851
sf3b3
Splicing factor 3b subunit 3.
   
    0.775
H2AZ1
Histone H2A.Z.
    
 
 0.773
LOC114440957
Histone H2A.V.
    
 
 0.773
ran
RAN, member RAS oncogene family.
   
 
 0.768
adgrd1
Adhesion G protein-coupled receptor D1.
   
 
 0.767
LOC114427749
TATA-box-binding protein-like.
    
 
 0.730
ENSPRNP00000036328
TATA box binding protein like 2.
    
 
 0.730
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.