STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppt2Palmitoyl-protein thioesterase 2. (300 aa)    
Predicted Functional Partners:
acsl3
acyl-CoA synthetase long chain family member 3.
    
 0.849
LOC114449861
long-chain-fatty-acid--CoA ligase 3-like.
    
 0.849
acsl4
acyl-CoA synthetase long chain family member 4.
    
 0.849
LOC114442480
long-chain-fatty-acid--CoA ligase 1-like.
    
 0.847
LOC114432027
long-chain-fatty-acid--CoA ligase 1-like.
    
 0.847
LOC114441117
long-chain-fatty-acid--CoA ligase 6-like.
    
 0.847
LOC114441539
long-chain-fatty-acid--CoA ligase ACSBG2-like.
    
 0.847
acsbg1
acyl-CoA synthetase bubblegum family member 1.
    
 0.847
LOC114445781
long-chain-fatty-acid--CoA ligase 6-like.
    
 0.847
acsbg2
acyl-CoA synthetase bubblegum family member 2.
    
 0.847
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.