STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436408Vesicular inhibitory amino acid transporter. (529 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.786
ENSPRNP00000012799
annotation not available
   
 
 0.785
LOC114447382
Probable vesicular acetylcholine transporter-A.
     
 0.777
LOC114452246
Probable vesicular acetylcholine transporter-B.
     
 0.777
snap25
Synaptosome associated protein 25.
   
 
 0.756
gad2
Glutamate decarboxylase 2.
   
 
 0.727
ENSPRNP00000013184
Zgc:101731.
   
 
 0.713
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.705
LOC114445964
Ras-related GTP-binding protein A.
   
 0.697
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.692
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.