STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgap3ADP ribosylation factor GTPase activating protein 3. (558 aa)    
Predicted Functional Partners:
copb1
Coatomer protein complex subunit beta 1.
    
 0.989
copg2
Coatomer protein complex subunit gamma 2.
    
 0.989
copa
Coatomer protein complex subunit alpha.
   
 0.981
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
0.973
arcn1
Archain 1.
   
 0.971
COPB2
Coatomer subunit beta'-like.
   
 0.957
LOC114450190
Coatomer subunit beta.
   
 0.957
cope
Coatomer protein complex subunit epsilon.
   
 0.873
bet1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.852
LOC114427227
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3-like.
    
0.850
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.