STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb7Ankyrin repeat and SOCS box containing 7. (331 aa)    
Predicted Functional Partners:
ENSPRNP00000005596
annotation not available
    
 0.842
LOC114444605
Cullin-5.
    
 0.842
CUL5
Cullin-5-like.
    
 0.842
LOC114451795
Ankyrin repeat and SOCS box protein 13-like.
  
 
0.822
asb6
Ankyrin repeat and SOCS box containing 6.
    
 0.804
rnf7
Ring finger protein 7.
    
 0.787
LOC114451652
Ankyrin repeat and SOCS box protein 13-like.
  
 
0.778
eloc
Elongin C.
    
 0.743
commd8
COMM domain containing 8.
   
  0.734
LOC114450811
NEDD8-like.
    
  0.715
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.