STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114428479Protein O-mannosyl-transferase TMTC2-like. (819 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.959
ints13
Integrator complex subunit 13.
   
 0.891
ints5
Integrator complex subunit 5.
    
 0.887
ints3
Integrator complex subunit 3.
    
 0.885
ints10
Integrator complex subunit 10.
   
 0.864
ENSPRNP00000027936
annotation not available
   
 0.835
ENSPRNP00000027937
annotation not available
   
 0.835
anapc4
Anaphase promoting complex subunit 4.
   
 0.820
cdc16
Cell division cycle 16.
    
 0.816
hspb11
Heat shock protein family B (small) member 11.
    
 0.815
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.