STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000001211annotation not available (80 aa)    
Predicted Functional Partners:
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.985
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.972
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.965
mybl2
MYB proto-oncogene like 2.
    
 0.955
LOC114439226
Uncharacterized LOC114439226.
    
 0.929
rb1
RB transcriptional corepressor 1.
    
 0.917
rbl1
RB transcriptional corepressor like 1.
    
 0.906
LOC114451377
Retinoblastoma-like protein 2.
    
 0.906
tfdp1
Transcription factor Dp-1.
    
 0.895
mybl1
MYB proto-oncogene like 1.
    
 0.881
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.