STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFAND6Zinc finger AN1-type containing 6. (284 aa)    
Predicted Functional Partners:
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.854
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.854
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.840
rps27a
Ribosomal protein S27a.
    
  0.823
pex6
Peroxisomal biogenesis factor 6.
     
 0.806
pex1
Peroxisomal biogenesis factor 1.
     
 0.709
pex5
Peroxisomal biogenesis factor 5.
    
 0.647
LOC114449229
PEX5-related protein-like.
    
 0.647
pex5l
Peroxisomal biogenesis factor 5 like.
    
 0.647
pex7
Peroxisomal biogenesis factor 7.
     
 0.644
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.