STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439562beta-1,3-N-acetylglucosaminyltransferase manic fringe-like. (356 aa)    
Predicted Functional Partners:
LOC114434069
Neurogenic locus notch homolog protein 2-like.
    
 0.882
LOC114440526
Neurogenic locus notch homolog protein 2-like.
    
 0.881
LOC114443529
Neurogenic locus notch homolog protein 1-like.
    
 0.861
notch1
Notch receptor 1.
    
 0.861
nelfb
Negative elongation factor complex member B.
   
 0.848
LOC114437296
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like.
  
  
 
0.840
LOC114440462
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like.
  
  
 
0.839
LOC114441362
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like.
  
  
 
0.813
polr2b
RNA polymerase II subunit B.
    
  0.764
polr2i
RNA polymerase II subunit I.
    
  0.759
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.