STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr1cRNA polymerase I and III subunit C. (351 aa)    
Predicted Functional Partners:
polr3f
RNA polymerase III subunit F.
   
 0.999
polr1b
RNA polymerase I subunit B.
  
 0.999
polr3k
RNA polymerase III subunit K.
   
 0.999
polr3b
RNA polymerase III subunit B.
  
 0.999
znrd1
Zinc ribbon domain containing 1.
   
 0.999
polr3d
RNA polymerase III subunit D.
   
 0.999
polr1a
RNA polymerase I subunit A.
  
 0.999
crcp
CGRP receptor component.
   
 0.999
polr3h
RNA polymerase III subunit H.
   
 0.999
twistnb
TWIST neighbor.
   
 0.999
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.