STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000001312Recombination activating gene 2. (493 aa)    
Predicted Functional Partners:
rag1
Recombination activating 1.
  
 0.999
ENSPRNP00000008012
annotation not available
   
 0.987
ENSPRNP00000031634
annotation not available
   
 0.987
znf704
Zinc finger protein 704.
   
 0.827
ENSPRNP00000001205
annotation not available
   
 0.827
LOC114433127
Zinc finger protein 395-like.
   
 0.827
ENSPRNP00000005066
annotation not available
   
 0.827
ENSPRNP00000005129
annotation not available
   
 0.827
ENSPRNP00000005621
annotation not available
   
 0.827
ENSPRNP00000005681
annotation not available
   
 0.827
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.