STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438919Nascent polypeptide-associated complex subunit alpha, muscle-specific form-like. (1435 aa)    
Predicted Functional Partners:
ecsit
ECSIT signaling integrator.
   
   0.806
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.761
phb
Prohibitin.
   
 
 0.606
PHB2
Prohibitin 2.
   
 
 0.594
mrps9
Mitochondrial ribosomal protein S9.
   
 
 0.501
fam210a
Family with sequence similarity 210 member A.
    
 
 0.499
mrps22
Mitochondrial ribosomal protein S22.
   
 
 0.485
tufm
Tu translation elongation factor, mitochondrial.
   
 
 0.484
LOC114427619
Synaptojanin-2-binding protein-like.
   
 
 0.481
atp6v1h
ATPase H+ transporting V1 subunit H.
   
  
 0.474
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.