STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp5pbATP synthase peripheral stalk-membrane subunit b. (252 aa)    
Predicted Functional Partners:
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.999
atp5f1c
ATP synthase F1 subunit gamma.
   
 0.999
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 0.999
atp5f1e
ATP synthase F1 subunit epsilon.
   
 0.999
atp5pf
ATP synthase peripheral stalk subunit F6.
   
 0.999
atp5f1d
ATP synthase F1 subunit delta.
   
 0.999
LOC114426164
Uncharacterized protein KIAA0754-like.
   
 0.999
atp5md
ATP synthase membrane subunit DAPIT.
   
 0.999
atp5mg
ATP synthase membrane subunit g.
   
 0.999
LOC114432702
ATP synthase subunit beta, mitochondrial.
   
 0.998
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.