STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl11Ribosomal protein L11. (179 aa)    
Predicted Functional Partners:
rpl38
Ribosomal protein L38.
   
 0.999
rps5
Ribosomal protein S5.
  
 0.999
rps18
Ribosomal protein S18.
  
 0.999
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.999
rpl14
Ribosomal protein L14.
  
 0.999
rps23
Ribosomal protein S23.
  
 0.999
mrpl9
Mitochondrial ribosomal protein L9.
  
 
 0.999
tufm
Tu translation elongation factor, mitochondrial.
  
 
 0.999
LOC114432973
60S ribosomal protein L12.
  
 0.999
rpl39
Ribosomal protein L39.
  
 0.999
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.