STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfrp1ADP ribosylation factor related protein 1. (201 aa)    
Predicted Functional Partners:
cog8
Component of oligomeric golgi complex 8.
   
 0.933
cog6
Component of oligomeric golgi complex 6.
    
 0.900
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.871
sys1
SYS1 golgi trafficking protein.
   
 
 0.869
stx16
Syntaxin 16.
    
 0.825
vps53
VPS53 subunit of GARP complex.
     
 0.817
rab41
RAB41, member RAS oncogene family.
    
 0.813
rab6a
RAB6A, member RAS oncogene family.
    
 0.813
LOC114435037
Ras-related protein Rab-6B.
    
 0.813
LOC114449681
Ras-related protein Rab-6B-like.
    
 0.813
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.