STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114445619Elongation factor 1-alpha. (502 aa)    
Predicted Functional Partners:
LOC114442728
Elongation factor 1-gamma.
   
 0.999
eef1b2
Eukaryotic translation elongation factor 1 beta 2.
   
 0.986
rps2
Ribosomal protein S2.
   
 0.959
LOC114447586
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like.
 
   
 0.955
rps3
Ribosomal protein S3.
  
 0.951
rps3a
Ribosomal protein S3A.
  
 0.950
LOC114439483
40S ribosomal protein SA.
  
 0.946
rplp0
Ribosomal protein lateral stalk subunit P0.
   
 0.943
rpl4
Ribosomal protein L4.
  
 0.942
rpl18a
Ribosomal protein L18a.
   
 0.940
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.