STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celsr3Cadherin EGF LAG seven-pass G-type receptor 3. (3267 aa)    
Predicted Functional Partners:
LOC114436660
Vang-like protein 2.
    
 0.599
VANGL2
VANGL planar cell polarity protein 2.
    
 0.599
prickle2
Prickle planar cell polarity protein 2.
   
 0.556
VANGL1
Vang-like protein 1.
    
 0.530
LOC114436656
Cytochrome b-c1 complex subunit 1, mitochondrial.
 
   
  0.528
pmpcb
Peptidase, mitochondrial processing beta subunit.
 
   
  0.525
pmpca
Peptidase, mitochondrial processing alpha subunit.
 
   
  0.522
ENSPRNP00000007711
VANGL planar cell polarity protein 1.
    
 0.517
invs
Inversin.
    
 0.500
PRICKLE1
Prickle-like protein 1.
   
 0.492
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.