STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amnAmnion associated transmembrane protein. (468 aa)    
Predicted Functional Partners:
cubn
Cubilin.
   
 0.952
ENSPRNP00000055210
CUB domain containing protein 2.
   
 0.952
pcolce2
Procollagen C-endopeptidase enhancer 2.
   
 0.895
LOC114445935
Procollagen C-endopeptidase enhancer 2-like.
   
 0.895
mfrp
Membrane frizzled-related protein.
   
 0.843
NRP1
Neuropilin-1a-like.
   
 0.839
nrp1
Neuropilin 1.
   
 0.839
LOC114441873
Transcobalamin-2-like.
     
 0.593
dab2
DAB adaptor protein 2.
      
 0.402
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.