STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000001439annotation not available (94 aa)    
Predicted Functional Partners:
acaa1
acetyl-CoA acyltransferase 1.
    
   0.769
pex7
Peroxisomal biogenesis factor 7.
    
   0.755
ecd
Ecdysoneless cell cycle regulator.
      
 0.511
ENSPRNP00000005092
annotation not available
    
   0.404
ENSPRNP00000005099
annotation not available
    
   0.404
ENSPRNP00000005116
annotation not available
    
   0.404
ENSPRNP00000005132
annotation not available
    
   0.404
phyh
phytanoyl-CoA 2-hydroxylase.
    
   0.404
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.