STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dph3Diphthamide biosynthesis 3. (83 aa)    
Predicted Functional Partners:
dph2
Diphthamide biosynthesis 2.
   
 0.998
dph1
Diphthamide biosynthesis 1.
   
 0.998
sergef
Secretion regulating guanine nucleotide exchange factor.
    
 
 0.984
elp3
Elongator acetyltransferase complex subunit 3.
   
 
 0.897
LOC114434311
Elongation factor 2-like.
    
 0.877
LOC114450122
Elongation factor 2.
    
 0.877
elp1
Elongator complex protein 1.
   
 
 0.864
gfm1
G elongation factor mitochondrial 1.
    
 0.800
EFL1
Elongation factor like GTPase 1.
    
 0.800
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.800
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.