STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114453080Transmembrane protein 237B-like. (410 aa)    
Predicted Functional Partners:
ephx2
Epoxide hydrolase 2.
    
  0.733
ENSPRNP00000027936
annotation not available
   
 0.728
ENSPRNP00000027937
annotation not available
   
 0.728
aprt
Adenine phosphoribosyltransferase.
  
 
 0.692
LOC114444492
Adenine phosphoribosyltransferase-like.
  
 
 0.692
ENSPRNP00000005691
annotation not available
    
  0.675
pard6b
Par-6 family cell polarity regulator beta.
    
 0.674
LOC114451956
Partitioning defective 6 homolog alpha-like.
    
 0.674
pard6g
Par-6 family cell polarity regulator gamma.
    
 0.674
ENSPRNP00000004910
annotation not available
  
 0.668
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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