STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426383Sialin-like. (495 aa)    
Predicted Functional Partners:
slc17a5
Solute carrier family 17 member 5.
  
  
 
0.843
ENSPRNP00000012799
annotation not available
     
 0.736
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.736
snap25
Synaptosome associated protein 25.
   
 0.656
LOC114447382
Probable vesicular acetylcholine transporter-A.
     
 0.650
LOC114452246
Probable vesicular acetylcholine transporter-B.
     
 0.650
LOC114436408
Vesicular inhibitory amino acid transporter.
     
 0.625
LOC114438913
Vesicular inhibitory amino acid transporter-like.
     
 0.625
LOC114429030
Vesicular inhibitory amino acid transporter-like.
     
 0.625
slc18b1
Solute carrier family 18 member B1.
     
 0.614
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.