STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426398c-Myc-binding protein-like. (103 aa)    
Predicted Functional Partners:
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.784
pgk1
Phosphoglycerate kinase 1.
    
 
 0.758
wdr90
WD repeat domain 90.
    
   0.699
ENSPRNP00000038679
Si:ch73-81k8.2.
    
 
 0.697
ENSPRNP00000037400
annotation not available
    
 
 0.672
spata4
Spermatogenesis associated 4.
    
   0.663
polr3c
RNA polymerase III subunit C.
    
   0.663
yars1
tyrosyl-tRNA synthetase 1.
      
 0.602
spag16
Sperm associated antigen 16.
    
   0.535
taf5l
TATA-box binding protein associated factor 5 like.
    
   0.535
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (38%) [HD]