STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432253Serine/arginine-rich splicing factor 10-like. (176 aa)    
Predicted Functional Partners:
LOC114445800
Serine/arginine-rich splicing factor 1B-like.
   
 0.951
LOC114445799
Serine/arginine-rich splicing factor 1.
   
 0.951
srsf7
Serine and arginine rich splicing factor 7.
   
0.913
LOC114440329
Protein HEXIM-like.
    
 0.884
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.871
LOC114435687
Serine/arginine-rich splicing factor 3-like.
   
0.867
SRSF3
Serine and arginine rich splicing factor 3.
   
0.867
ENSPRNP00000013465
annotation not available
   
 0.830
ENSPRNP00000017655
Serine and arginine rich splicing factor 4.
   
 0.828
LOC114429157
Serine/arginine-rich splicing factor 5-like.
   
 0.828
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.