STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431694Melanophilin-like. (532 aa)    
Predicted Functional Partners:
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.768
LOC114443816
Ras-related protein Rab-27B-like.
    
 
 0.768
LOC114441569
Ras-related protein Rab-27B-like.
    
 
 0.768
ENSPRNP00000017182
annotation not available
    
 0.721
ENSPRNP00000017186
annotation not available
    
 0.721
myo5b
Myosin VB.
    
 0.721
myo5a
Myosin VA.
    
 0.721
rilpl2
Rab interacting lysosomal protein like 2.
    
 
 0.715
iqcb1
IQ motif containing B1.
    
 0.507
spata17
Spermatogenesis associated 17.
    
 0.507
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.