STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals3bpGalectin 3 binding protein. (597 aa)    
Predicted Functional Partners:
ENSPRNP00000027936
annotation not available
     
 0.854
ENSPRNP00000027937
annotation not available
     
 0.854
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
     
 0.844
cmpk1
Cytidine/uridine monophosphate kinase 1.
     
 0.819
nme6
NME/NM23 nucleoside diphosphate kinase 6.
     
 0.817
LOC114453755
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like.
     
 0.815
NT5M
5',3'-nucleotidase, mitochondrial.
     
 0.815
nme7
NME/NM23 family member 7.
     
 0.813
itpa
Inosine triphosphatase.
     
 0.812
LOC114439969
Nucleoside diphosphate kinase, mitochondrial-like.
     
 0.812
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.