STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437859Neoverrucotoxin subunit alpha-like. (702 aa)    
Predicted Functional Partners:
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.750
cdc73
Cell division cycle 73.
    
  0.672
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.663
nelfe
Negative elongation factor complex member E.
    
  0.627
MLKL
Mixed lineage kinase domain-like protein.
    
  0.589
ENSPRNP00000056761
annotation not available
    
  0.586
brcc3
BRCA1/BRCA2-containing complex subunit 3.
    
  0.583
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.572
nek7
NIMA related kinase 7.
    
  0.568
nek6
NIMA related kinase 6.
    
  0.568
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.