STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a33Solute carrier family 25 member 33. (317 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.796
LOC114443054
60S ribosomal protein L36a.
   
 
 0.785
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.694
pex12
Peroxisomal biogenesis factor 12.
     
 0.694
pex16
Peroxisomal biogenesis factor 16.
   
 
 0.676
LOC114433615
5-hydroxyisourate hydrolase-like.
  
 
 0.674
LOC114452291
5-hydroxyisourate hydrolase-like.
  
 
 0.674
LOC114437622
Dihydropyrimidinase-related protein 2-like.
  
 
 0.657
dpys
Dihydropyrimidinase.
  
 
 0.657
LOC114429170
Dihydropyrimidinase-related protein 5-like.
  
 
 0.657
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.