STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc2a5Solute carrier family 2 member 5. (512 aa)    
Predicted Functional Partners:
LOC114448986
Cytochrome b5 reductase 4.
   
  0.839
ephx2
Epoxide hydrolase 2.
  
 
 0.647
tk1
Thymidine kinase 1.
     
 0.616
cstf3
Cleavage stimulation factor subunit 3.
  
 
 0.613
tyms
Thymidylate synthetase.
  
 
  0.598
oat
Ornithine aminotransferase.
  
 
 0.591
ENSPRNP00000011360
annotation not available
   
 0.586
LOC114448015
Glyceraldehyde-3-phosphate dehydrogenase 2.
   
 0.586
LOC114449667
Glyceraldehyde-3-phosphate dehydrogenase-like.
   
 0.586
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.586
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.