STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114435220Elongation of very long chain fatty acids protein 1-like. (329 aa)    
Predicted Functional Partners:
LOC114433933
Very-long-chain 3-oxoacyl-CoA reductase-B-like.
   
 0.878
LOC114452557
Very-long-chain 3-oxoacyl-CoA reductase-A-like.
   
 0.878
LOC114446299
Very-long-chain 3-oxoacyl-CoA reductase-like.
   
 0.870
elovl7
ELOVL fatty acid elongase 7.
  
  
 
0.837
LOC114449965
Elongation of very long chain fatty acids protein 1-like.
  
  
 
0.836
oxsm
3-oxoacyl-ACP synthase, mitochondrial.
     
 0.812
elovl5
ELOVL fatty acid elongase 5.
  
 
 
0.808
elovl4
ELOVL fatty acid elongase 4.
  
 
0.773
LOC114448159
Elongation of very long chain fatty acids protein 4-like.
  
 
0.772
hacd2
3-hydroxyacyl-CoA dehydratase 2.
    
 0.752
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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