STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp36Ubiquitin specific peptidase 36. (1117 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.755
LOC114450921
Breast cancer metastasis-suppressor 1 homolog.
    
  0.700
LOC114429200
Breast cancer metastasis-suppressor 1-like protein-A.
    
  0.700
LOC114450732
CAAX prenyl protease 2-like.
     
 0.700
brms1l
BRMS1 like transcriptional repressor.
    
  0.700
LOC114446478
CAAX prenyl protease 2-like.
     
 0.700
cdc25b
Cell division cycle 25B.
    
 0.689
ENSPRNP00000053095
annotation not available
     
 0.680
usp10
Ubiquitin specific peptidase 10.
     
0.629
p2rx1
Purinergic receptor P2X 1.
   
 0.622
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.