STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpc1Mitochondrial pyruvate carrier 1. (111 aa)    
Predicted Functional Partners:
mpc2
Mitochondrial pyruvate carrier 2.
  
0.988
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
    0.804
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.540
ERG28
Ergosterol biosynthesis 28 homolog.
   
    0.480
me1
Malic enzyme 1.
    
 
 0.478
me2
Malic enzyme 2.
    
 
 0.478
me3
Malic enzyme 3.
    
 
 0.478
spag6
Sperm associated antigen 6.
      
 0.452
ENSPRNP00000036001
annotation not available
      
 0.439
dad1
Defender against cell death 1.
   
    0.438
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.